Resolving Tax Notices for Startups - Income Tax, GST & TDS

Resolving Tax Notices for Startups - Income Tax, GST & TDS

When startups receive income tax or GST notices, it can disrupt fundraising and operations. SMACAS has represented early-stage and funded startups before Assessing Officers, GST authorities, and appellate forums - resolving scrutiny notices, ITC mismatches, and angel tax demands with documented outcomes.

Frequently Asked Questions

What should a startup do when it receives a Section 143(2) scrutiny notice?

A startup receiving a Section 143(2) notice must respond within the specified deadline - typically 30 days - with supporting documents for all income and deduction claims. Engage a Chartered Accountant immediately to assess the scope of scrutiny, compile documentation, and represent before the Assessing Officer. Delayed or incomplete responses lead to ex-parte assessments and tax additions.

Why do startups get income tax notices?

Startups commonly receive notices for high deductions against low revenue, foreign payments without TDS, angel tax (Section 56(2)(viib)) on share premium, mismatches between Form 26AS and ITR, and first-year losses. ESOP deductions, R&D claims, and startup exemption certificates under Section 80-IAC are also frequent triggers.

Can a startup receive a GST audit notice?

Yes. GST authorities issue audit notices under Section 65 for mismatches between GSTR-1 and GSTR-3B, high ITC claims relative to outward supply, or sudden zero-turnover months. Startups with B2B and export invoices are especially scrutinised. Timely response with invoice-level reconciliation is critical.

What is Section 148 reassessment and how does it affect startups?

Section 148 allows the tax department to reopen past assessments if income is believed to have escaped assessment. For startups, this often arises from undisclosed investor payments, foreign remittances, or crypto transactions flagged by the Financial Intelligence Unit. The reassessment window is 3 years for amounts below ₹50 lakh and 10 years for larger amounts.

Need help with a tax notice?

Our CAs are available for immediate consultation. Response within 24 hours.

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